Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945086.1_cds_XP_016487723.1_78424
CDS Infomation

[gene=LOC107807802] [db_xref=GeneID:107807802] [protein=la-related protein 1C-like] [protein_id=XP_016487723.1] [location=join(8154..8663,8926..9508,9592..9736,9840..9930,14043..14114,14808..14996)] [gbkey=CDS]
Sequence

ATGGCTACAGCGGCTCCAACTCCGGCTCAGGCTCATCATTCTCACCGGAATACTAACCCA
GACACCGGCACCGGCGGTCTAAACAGCCCACAGTATCGGCGATCATCAGCCGCTGCGCGT
GGCGTTTCCTCGACTTGGACGCAGATTGTTCGCAGTGGCGAATCAGAATCCACCGTGGCG
GCGGCGGCTTCCTCTTCACCTCCTCCACCTTCACTTTCTCCTCCTGCGTCTTCTGAGAAA
ATCGTTCACTCTGATTATTCTCTTTCTGAAGACGTGGCTACAGCTGGTAGTGCTGCTACA
GAAGGTCAGCTTGAGAGCTCTGATAATAGCAACAACAATGTGTCTAAAAAGCAGGCTTGG
AGTAAACCGTCAAATGGCGTAGCTGAGGTCAGTCCAGTTATGGGTGCTGTCTCTTGGCCT
GCTCTCTCTGAGTCCACTAAGGCTTCACCTAAATCGCCATCTTCTGATTCACTCAAAGCT
CTCTCGGACGGATCAGTTTCCGTATCACAGGGCACGGAAATGACATCGTCTTCTCATAGG
CAAGCTAATACTAATAATGCAAACCCTAATTTAATTTCGAACCATGTTGGTCCCACCCGC
CAAAGGTCTATGAAGCGAGGAGGTGGCTATTCAAACCATAATGCATCAGCCAATGGAGGT
TTTCCTCAGCAACAGGCGCAGGGTTCTGAGGTGGAAATAGTAACTAATAATTCTGGGAAG
TCAGGAAATTTTGGTGCTGAGTCTTCTTCAAAGGATACTAGTCATAGGGATGGTGGACAG
TCGGGAGGATTTGGATCTCAATCACATGGTGGAAATGAGCACCAACATCAACGAACCTCA
AACAGGAGAGGCAATGTTGGTCCACACTCCCATGGAGATGGCACTTATAATCATGGTTAT
GGGGGTAGGCGTGATCAGGAACGTGGAAATCAGGATTGGAAACCCCACAGAGGTTGGGGG
AATAGGGATGCGCCCATGCAGCCACATAGAGTTCCAGCAAGGCCATTTATGGGAGGCCCA
CCTCATACTTCTCCACCTTTTATACCTCCACACATGCCTGTGCAGCCCTATCGAGCTCCT
ATGGTTTACCCTGAAGTTGCACCTGTATATTATTTTCCAGGTCCACTGCCTGATTCATTT
AGAATGCCTATGCTTTCTCCTGTGCCACCTTTCTTCTTTCATGTTCCAGATCCCCAGATG
CAAACCAAAATAGTGAACCAGATAGATTATTATTTCAGTGATGAAAATTTAATTAAGGAT
ACGTTCTTGCGACGGAACATGGATGAACATGGATGGGTTCCCGTTACGCTAATAGCAGGC
TTCAAGAAAGTAATGCAGCTAACTGATAATATACAACTGATACTGGACGTTATGAGGTCC
TCTACTGCTGTAGAAGTGCAGGGCGAAAAGTTAAGGCGGAGAAATGACTGGAATCGTTGG
CTCATACCACCATCAGTTCAGAATTCAACCATGGCAGGTCCTCAATCTCCACAAAAGTCT
AGTCCTGATTTTCTAGCAGAAAATCTCCAACGTGTTGCATTTGATGATAAGACTCTAATA
CACGGAACTGCCGAAGCATATTCCGTCTGA

Peptide Sequence

PEP ID

XP_016487723.1
PEP Infomation

PREDICTED: la-related protein 1C-like [Nicotiana tabacum]
Sequence

MATAAPTPAQAHHSHRNTNPDTGTGGLNSPQYRRSSAAARGVSSTWTQIVRSGESESTVA
AAASSSPPPPSLSPPASSEKIVHSDYSLSEDVATAGSAATEGQLESSDNSNNNVSKKQAW
SKPSNGVAEVSPVMGAVSWPALSESTKASPKSPSSDSLKALSDGSVSVSQGTEMTSSSHR
QANTNNANPNLISNHVGPTRQRSMKRGGGYSNHNASANGGFPQQQAQGSEVEIVTNNSGK
SGNFGAESSSKDTSHRDGGQSGGFGSQSHGGNEHQHQRTSNRRGNVGPHSHGDGTYNHGY
GGRRDQERGNQDWKPHRGWGNRDAPMQPHRVPARPFMGGPPHTSPPFIPPHMPVQPYRAP
MVYPEVAPVYYFPGPLPDSFRMPMLSPVPPFFFHVPDPQMQTKIVNQIDYYFSDENLIKD
TFLRRNMDEHGWVPVTLIAGFKKVMQLTDNIQLILDVMRSSTAVEVQGEKLRRRNDWNRW
LIPPSVQNSTMAGPQSPQKSSPDFLAENLQRVAFDDKTLIHGTAEAYSV

Transcript Sequence

Gene sequence data has not been registered.